ContentslistsavailableatScienceDirect
Journal
of
Pharmaceutical
and
Biomedical
Analysis
jou rn al h om e p a g e :w w w . e l s e v i e r . c o m / l o c a t e / j p b a
Ligand
fishing
using
new
chitosan
based
functionalized
Androgen
Receptor
magnetic
particles
Michał
Piotr
Marszałł
a,∗,
Wiktor
Dariusz
Sroka
a,
Adam
Sikora
a,
Dorota
Chełminiak
b,
Marta
Ziegler-Borowska
b,
Tomasz
Siódmiak
a,
Ruin
Moaddel
caNicolausCopernicusUniversityinTorun,LudwikRydygierCollegiumMedicuminBydgoszcz,DepartmentofMedicinalChemistry,ul.Jurasza2,85-089
Bydgoszcz,Poland
bNicolausCopernicusUniversityinTorun,FacultyofChemistryGagarina7,87-100Torun,Poland
cLaboratoryofClinicalInvestigation,NationalInstituteonAgingIntramuralResearchProgram,NationalInstitutesofHealth,Baltimore,MD,USA
a
r
t
i
c
l
e
i
n
f
o
Articlehistory:
Received13November2015
Receivedinrevisedform17March2016 Accepted12April2016
Availableonline4May2016
Keywords: Androgenreceptor Antiandrogens Chitosan Ligandfishing Magneticbeads
a
b
s
t
r
a
c
t
Superparamagneticnanoparticleswithchemicallymodifiedchitosanhasbeenproposedasapotential supportfortheimmobilizationoftheandrogenreceptor(AR).Thestudyinvolvedcomparisonofdifferent ARcarrierslikecommerciallyavailablemagneticbeadscoatedwithsilica(BcMag)andchitosancoated nanoparticleswithdifferentamountofaminogroups.Theimmobilizationwascarriedoutthrough cova-lentimmobilizationoftheARthroughtheterminalaminogrouporthroughavailablecarboxylicacids. TheinitialcharacterizationoftheARcoatedmagneticbeadswascarriedoutwithdihydrotestosterone, aknownARligand.Subsequently,chitosanmodifiednanporticleswithlong-distancedprimaryamino groups(Fe3O4CS-(NH2)3)(upto8.34mM/g)wereusedforfurtherstudytoisolateknownARligands
(bicalutamide,flutamide,hydroxyflutamideandlevonogestrel)fromamixtureoftestedcompoundsin ammoniumacetatebuffer[10mM,pH7.4].Theresultsshowedthattheselectednanoparticlesarea promisingsemi-quantitativetoolfortheidentificationofhighaffinitycompoundstoARandmightbeof specialimportanceintheidentificationofnovelagonistsorantiandrogens.
©2016ElsevierB.V.Allrightsreserved.
1. Introduction
Androgenreceptor(AR)isaligand-dependenttranscription fac-torthatcontrolstheexpressionofspecificgenesandisamember ofthenuclearreceptor(NR)superfamily[1].Themechanismby whichandrogenselicittheiractionsondifferenttissueshasbecome clearer over the years. The AR protein has3 major functional domains: a variable N-terminal domain (NTD), a highly con-servedDNA-bindingdomain(DBD)andaconservedligand-binding domain(LBD). Testosteroneand dihydrotestosterone (DHT) are endogenoushormoneswhichbindtotheligand-bindingdomain andactivateARasatranscriptionfactor.Adecreasein circulat-inglevelsofthesehormonesresultsinadeclineinmusculoskeletal function,increaseinbodyfat,decreaseinmusclemassandstrength andrecentlyhasbeenidentifiedasariskfactorforAlzheimers dis-ease[2,3].Asaresultthereisapressingneedfortheidentificationof newpotentialandrogens.While,hormonereplacementtherapyis available,itisnotwidelyusedduetopotentialsideeffects.In
addi-∗ Correspondingauthor.
E-mailaddress:mmars@cm.umk.pl(M.P.Marszałł).
tiontoandrogens,theidentificationofantiandrogenscanbeused forthetreatmentofprostatecancerinmenandhyperandrogenism inwomen[4].Forthisreason,theidentificationofantiandrogens isalsooftherapeuticinterest.Currentantiandrogenstherapiesare usedtotreatprostatecancer,includebicalutamide,flutamideand nilutamidehowever,thesedrugs haveadverseeffects and drug resistance[5].
Severalmethodshavebeendevelopedfortheidentificationof novelligandsfortheAR.Forexample,high-throughputscreening techniques,wherearapidassayiscarried outtodeterminethe biologicalorbiochemicalactivityofalargenumberofdrug-like compounds,hasbeenusedtostudytheinteractionsofendocrine disruptingchemicalswiththeAR[4].Asaresult,HTSisusefulfor thediscoveryandidentificationofnewselectiveandrogenreceptor modulators[6,7].Anothermethoddevelopedfortheidentification ofnovelARligandsistheARbinding-screeningassays.Thiswas alsodevelopedtocharacterizereceptormediatedendocrine activ-itybymeasuringtheinhibitionof ARtranscriptionalactivityby smallmoleculesormeasuringtheblockadeofligand-bindingAR [8,9].While useful,thesebiochemicalassays arelimitedbylow purityandstabilityoffunctionalARprotein.Therearealso com-merciallyavailableassays,includingtheARcompetitorassayswith http://dx.doi.org/10.1016/j.jpba.2016.04.013
130 M.P.Marszałłetal./JournalofPharmaceuticalandBiomedicalAnalysis127(2016)129–135
fluorescentorradiolabeledandrogenligand[10–12],however,due tothelownumberlabeled-ligands,wastedisposalandsafetythey havesomelimitationascommontoolsindrugdiscovery.
Anoveltechniquethathasbeensuccessfullyusedforthe iden-tificationofactivecomponentsfromacomplexmixtureisligand fishing[13–15].Inthesestudies,thetargetedproteinis immobi-lizedontomagneticparticlessurfaceandtheresultingstationary phaseisusedto“fish”outpotentialactivecompoundsfrom differ-entmixtures[11,13,16–18].Thishasbeenpreviouslydemonstrated withitsapplicationfor theisolation ofactive compoundsfrom naturalproductsfromdifferentmatrixesincludingplantandcell extracts[12,15,19–21].
Several types of magnetic beads have been employed for biomoleculeimmobilizationand drugdelivery[13,22].Recently, therehasbeenanincreasinginterestinmagnetite(triiron tetraox-ide) based micro- and nanoparticles for theirpotential use in differentbiomedicalandchemicalareas,becauseoftheir“flexible” surface.Thechemicallymodifiedsurfacewithinorganicororganic moleculesisresponsibleforoxidativestabilizationaswellas func-tionalizationofparticles.Thepolycationicpolymer,chitosan(CS), hasrecently,becomeaninterestingmaterialduetoitsnon-toxicity, goodmechanicalproperties,biocompatibility,and biodegradabil-ity[23].Asaresult,CSbasedmagneticnanoparticleshavegained increasedattentionasauniversalcarrierfordrugdeliveryandfor enzymeimmobilization[24,25].However,thispolymerdoesnot exhibitsufficientchemicalstabilityinaqueousenvironment.Asa result,anovelmagnetitenanoparticlecoatedwithamodified chi-tosanmaterialwassynthesized,specificallydesignedforenzyme (lipase)and protein (human serum albumin, HSA) immobiliza-tions[26].Theresultingcoatedsurfacewithchemicallymodified chitosanandlong-distancedprimaryaminogroupsgives riseto dispersioninorganicandwatersolventsasit isunabletoform intramolecularhydrogenbinding.Thus,thehydrophobicsurface hassignificantinfluencesoncatalyticactivityoftheimmobilized enzymese.glipases[27].Hence,thesenanoparticleswerestudied aspotentialmagneticsupportsforAR-proteinimmobilization. 2. Materialsandmethods
2.1. Materials
Androstanedione,bicalutamide,dexamethasone, dibutylphtha-late, dihydrotestosterone (DHT), flutamide, hydroxyflutamide, levonorgestrel, lidocaine hydrochloride, 1-ethyl-3-(3-methylaminopropyl)carbodiimide (EDC), gluteraldehyde, hydroxylaminehydrochloride,N-hydroxysulfosuccinimide (Sulfo-NHS), potassium phosphate dibasic, pyridine (99.8%), sodium azide, sodiumcyanoborohydride, sodiumchloride, trizmabase, calciumchloride,glycerolandsodiumphosphatemonobasicwere purchasedfromSigma–Aldrich(Stainhaim,Germany).HPLCgrade Acetonitrile(ACN)and methanol(MeOH)werefromPOCh (Gli-wice,Poland).Humanandrogenreceptor(AR)fulllengthprotein wasfromAbcam(Cambridge,UK).
Commercially available amine terminated magnetic beads (BcMag)(50mg/mL,1mdiameter)of“sophisticallycoatediron oxideparticlestoprovideprimaryaminogroups”,werepurchased fromBioclonInc.(SanDiego,CA,USA).Amanualmagnetic sepa-ratorDynalMPC-SwaspurchasedfromInvitrogen(Carlsbad,CA, USA).Solutionswerepreparedusingpurified waterusedinthe studyusingaMilli-QWaterPurificationSystem(Millipore,Bedford, MA,USA).
2.2. Synthesisofchitosanmagneticnanoparticles
The3groupsofmagneticnanoparticleswerepreparedbased ontheFe3O4,coatedwithchemicallymodifiedchitosanand
char-acterized by ATR-FTIR, 13C NMR, TGA/DTG/DSC, as previously described [21]. All of chitosan coated nanoparticles were pre-paredviastandardco-precipitationprocedure.Toobtainonelong aminesubstituentinchain,thecoatedchitosanwasreactedwith gluteraldehydeandaqueoussolutionofethylenediamine. Materi-alscontainingtwoandthreeaminesubstituentswerepreparedby thereactionofchitosanwithepichlorohydrininalkalisolutionto formcarbonylgroupswhichweretreatedwithglutaraldehydeand finallywithethylenediamine[28].
Theresultingmagneticmaterialswithsurfacemodified with long-distanced amino groups were used as a support for AR-bioligands binding. In Fig. 1 the magnetic nanoparticles (Fe3O4 CS-(NH2),Fe3O4 CS-(NH2)2andFe3O4 CS-(NH2)3)with
a1,2or3aminogroupsdistancedfromthepolymerchainwere presented.
2.3. ARimmobilizationontothesurfaceofmagneticbeads
Thefollowingmagneticbeads(MB)wereusedinAR-bioligands bindingstudy:(a)commerciallyavailableamine-terminated mag-neticbeads(BcMag)withfunctionalgroupdensityof∼250mol/g ofMBand(b)chitosancoatedMBwithsurfacemodifiedwith long-distancedaminogroups−Fe3O4 CS-(NH2),(c)Fe3O4 CS-(NH2)2
andd)Fe3O4 CS-(NH2)3 withtheamountoffreeaminegroups
3.15, 5.93and 8.34mM/g,respectively. TheAR-fullprotein was immobilizedusingpreviouslyprotocolwithmodification[16]. 2.3.1. ImmobilizationviaN-terminal
TheaminegroupsontheBcMagbeadsandtheARwerelinked byapreviouslydescribedmethod[18],withslightmodifications. Briefly,5mgofMBwerewashedwith1mLpyridinebuffer[10mM, pH6.0]inmicrocentrifugetube.Thesupernatantwasdiscardedand MBweresuspendedin1mLof5%gluteralaldehydeandshakenfor 3h.TheMBwerethenwashed3timeswith1mLpyridinebuffer [10mM,pH6.0]toremovetheunreactedgluteraldehyde.200Lof bufferwastransferredwith200goffulllengthARproteintothe MBandleftundergentlerotationat4◦Cfor24h.Next,the super-natantwasdiscardedand0.5mLofglycine(1M,pH8)wasadded. Themixturewasshakenfor30minandsupernatantdiscarded.The resultingMBwasrinsedandstoredinphosphatebuffer[10mM, pH7.4]with0.02%sodiumazide.Thecontrolglycine-coatedMB weremadeforeach groupofparticlesinthesamemannerbut withoutARprotein.Finally,the4groupsofMBwerepreparedby immobilizationofARproteinontothesurfaceofMBthroughthe aminogroup:(a)BcMag(NT)-AR,(b)Fe3O4 CS-(NH2)(NT)-AR(c)
Fe3O4 CS-(NH2)2(NT)-ARand(d)Fe3O4 CS-(NH2)3(NT)-AR.
2.3.2. ImmobilizationviaCOOH group
Fortheimmobilizationofthe COOHgroup,wefolloweda pre-viouslypublishedmethodwithslightmodifications[16].Briefly, 5mgofMBaftertherinsingwith1mLofMES[100mM,pH5.5]in amicrocentrifugetubeweresuspendedin300Lofrinsingbuffer, 200goffulllengthARproteinand50Lofamixtureof10mg ofEDCand15mgofsulfo-NHSin1mLofwater.Themixturewas vortex-mixedandleftfor3hat4◦Cwithgentlerotation.Next,the 20Lof1Mhydroxylaminewasaddedtothefinalreactionandleft for3hat4◦Cwithgentlerotation.Thesupernatantwasdiscarded andtheMBwithimmobilizedARproteinwererinsed3timeswith 1mLofphosphatebuffer[10mM,pH7.4]containing0.02%sodium azide.Thecontrolhydroxylamine-coatedMBweremadeforeach groupofparticles inthesame mannerbutwithoutARprotein. Finally,the4groupsofMBwerepreparedbyimmobilizationof ARprotein ontothe surfaceof MBthrough thecarboxy group: BcMag(C)-AR,Fe3O4 CS-(NH2)(C)-AR(c)Fe3O4 CS-(NH2)2(C)-AR
Fig.1.StructureofpreparedFe3O4CSnanoparticles(a)anddifferentmodificationsofchitosan:witha1(b),2(c)or3(d)aminogroupsdistancedfromthepolymerchain.
2.4. Ligandfishing
5mg ofthe ARcoatedbeads or controlwassuspended in a microcentrifugetubewith10nMoftheselecteddrugs(Table1) andincubatedin500Lofammoniumacetatebuffer[10mM,pH 7.4]individually.Thetubewasmixedfor2minandthenplaced formagneticseparatorfor30s.Thefirstsupernatant(S1) includ-ingnon-bindingcompoundswascollected.Thebeadswerethen washed with 500L of ammonium acetate buffer[10mM, pH 7.4]for 2minandthesupernatant (S2)wasseparated and col-lected.Theboundligandswerethenelutedwith500Lofelution buffer(ammoniumacetatebuffer[10mM,pH7.4])containing20% methanol(v/v twicefor 2min(S3 andS4). Themagneticbeads washingprocedurebetweenextractionsconsistedofadoublewash with500Lofammoniumacetatebuffer[10mM,pH7.4]for2min. Thebindingtestswereperformedindividuallyforeachcompound andtoanequalmixtureofDHT,bicalutamide,dexamethasoneand lidocaine.
ThecollectedsupernatantswereanalyzedbyShimadzuUPLC Nexera X2 system consisting of: LC-30AD pomp with Kinetex C18, 150×4.6mm, 2.6u, 100A column, SIL-30AC autosampler, CTO-20AC column oven, FCV-20-AH2 valve unit and DGU-20A5RdegassercoupledwithShimadzu8030ESI–MS/MStriple quadrupolemassspectrometer.Mobilephaseconsistedof(A)0.1% formicacidinmethanol(v/v)and(B)0.1%formicacidinwater (v/v).ProportionsbetweensolventAandsolventBwere60–40. Flowratewassetto0.8mL.min−1,chromatographictemperatureat 35◦Cwithmonitoredpressurebelow500bar.Sourceandcollision
energiesaswellasfragmentorvoltageswereoptimizedforeach analytebyinfusingapurestandardofeachcompounddissolved in 50%methanol.Sourceconditionsweresetto:nebulizing gas flow1.5L/min,dryinggasflow15.0L/min,DLtemperature250◦C, heat blocktemperature400◦C.Injectionvolume,precursor and productsions,ionizationmodeofeachcompoundarepresented inTable1.Allanalysesofsupernatantweredoneafterincubation processintriplicate.Thesemi-quantificationwascarriedoutby meansofsignalratioofincubatedligandsinsupernatantto sig-nalofpurestandard.Thecalculatedstandardcurvesforalltested compoundswerelinearwithcorrelationcoefficientsgreaterthan 0.9932withalinearrangefrom0.1nMto10nM.
3. Resultsanddiscussion
CovalentimmobilizationoftheAR-proteinwasperformedon thesurfaceofamineterminatedmagneticbeadsbytheformation oftheamidebound((C)-AR)orreductiveamination((NT)-AR)ofa carboxylgrouportheaminoterminal,respectively.TheAR-protein wasimmobilizedonto4differenttypesofiron-oxide multifunc-tionalmagneticnanomaterialby2linkers,resultingin8typesof AR-proteinmagneticbeads(4(NT)-ARand4(C)-AR)(section2.3). InordertodeterminewhichARcoatedmagneticparticleresultedin moreefficientimmobilization,10nMofdihydrotesterone(DHT),a knownARligand,wasincubatedwitheachofthe8magnetic parti-cles(4Cand4NT)versuscontrolfor2mininbufferaccordancewith protocolofligandfishing(section2.4)andanalyzedbyESI–MS/MS massspectrometer.Forthecontrolbeads,thenon-specific
bind-132 M.P.Marszałłetal./JournalofPharmaceuticalandBiomedicalAnalysis127(2016)129–135
Table1
Structuralformulas,activityandanalyticalparametersofstudiedcompounds.
Compound Activity/function Injectionvolume(L) Ionizationmode Precursor[m/z] Products[m/z]
androgen 10 (+) 291.3 255.3 273.3 androgen 1 (+) 287.2 109.1123.0263.3 anti-androgen 1 (−) 429.0 255.0185.0184.0 anti-androgen 3 (+) 393.2 373.3147.0237.1 anti-androgen 10 (+) 279.2 149.0205.1121.0 anti-androgen 5 (−) 275.1 201.9205.0186.0 anti-androgen 1 (−) 291.0 205.0175.0155.0 androgen 10 (+) 313.3 109.1245.3135.0 non-binder 5 (+) 234.6 58.1 86.1
ingfora2minincubation withDHTresultedina similarrange
ofunboundDHTinthesupernatant(85.9–90.2%)andboundDHT
(S3+S4)<3%foralltypesofstudiedmagneticbeads.Forthe(C)-AR
magneticparticles,nodifferencewasobservedbetweenthe
(C)-ARandcontrolmagneticbeads(datanotshown),withthelevels
ofunboundligandsimilarforallthe(C)-ARandcontrolparticles
studied.Similarlyfor3ofthe4NT-AR(Fig.2a)andforall4
con-trols(Fig.2b)thelevelsof unboundligand(DHT)in S1ranged from80to90%,withtheexceptionoftheFe3O4 CS-(NH2)3
(NT)-ARmagneticparticles,wherethelevelsofsupernatants(unbound ligand)decreased to62.3% (Fig.2a).Of interest, when compar-ingthe chitosan magnetic particlesfor the 4-NT-ARs,was that withincreasingconcentrationsoffreeaminogroup,anincreasein retainedDHTwasobserved.Forexample,increasingtheamountof freeaminogroupsfrom3.15mM/g(Fe3O4 CS-(NH2))to5.93mM/g
(Fe3O4 CS-(NH2)2),resultedinasignificantincreaseofretained
DHTfrom5%to10%(S3+S4)(p<0.05)andadecreaseinunbound ligand(S1)from∼90%to80%,respectively.Similarly,increasing thefreeaminogroupsto8.34mM/g(Fe3O4 CS-(NH2)3),resulted
inasignificantdropinunboundligand(S1)to∼60%and a cor-respondingincreaseinretainedDHTto∼20%(p<0.0001).These resultsleadtotheassumptionthatthehigheramountoffreeamino
groupsresultsinahigheryieldofARimmobilizationviathe N-terminus.Similarobservationsweredescribedpreviouslywiththe useofnanoparticlesasasupportforthecovalentimmobilization oflipaseandhumanserumalbumin[21].Theresultsindicatethat magneticnanoparticlescoatedwithchemicallymodifiedchitosan withanincreaseinfreelong-distancedaminogroupscanimprove theimmobilizationprocessofbiomolecules.Theresultofinactivity ofthe(C)-ARisnotsurprising,astheARcontainsmultiple sur-facecarboxylicacidsthataresolventaccessibleforEDC-mediated crosslinking, whilethe (NT)-AR is specifictothe N-terminal of theprotein.Thisnon-specificityinthe(C)-AR,mayresultinthe immobilizationoftheproteinthatmayblockaccesstotheligand bindingsite,orcausestericeffectsthatmaypreventthebinding ofknownligands.Thedeterminationoftheoptimalcrosslinkerfor newproteinsanditsmolarratiosforreactionsisoftenempirically determined.
As a result, the Fe3O4CS-(NH2)3(NT)-AR nanoparticles were
usedforalltheligandfishingstudies.Theselectedmagneticbeads wereincubatedwitha seriesofknowncompoundswith differ-ent affinities to AR (Fig. 3). The results demonstrate that the highaffinitybinders,bicalutamide,flutamide,hydroxyflutamide and levonogestrel, were selectively retained on the Fe3O4
CS-Fig.2.Comparisonofdihydrotestosterone(DHT)bindingtodifferentmagneticnanoparticleswitha)immobilizedAR-proteinvieaminegroupandb)controlnanoparticles; S1-S4—supernatantsdescribedinligandfishingprocedure.
Fig.3.Comparisonofbindingofandrostenedione,bicalutamide,dexamethasone,dibutylphthalate,flutamide,hydroxyflutamide,levonorgestrelandlidocaineHClto a)Fe3O4CS-(NH2)3(NT)-ARmagneticbeadsandb)controlnanoparticles;S1-S4—supernatantsdescribedinligandfishingprocedure.
134 M.P.Marszałłetal./JournalofPharmaceuticalandBiomedicalAnalysis127(2016)129–135
Fig.4.ThemixtureligandfishingofDHT,bicalutamide,dexamethasoneandlidocaineHClwiththeuseofFe3O4CS-(NH2)3(NT)-ARmagneticbeads;S1-S4—supernatants
describedinligandfishingprocedure.
Table2
Thecomparisonvaluesofbindingparametersreportedinliteratureandmeasured inpresentedstudy. Compound Relative binding affinitya(nM) IC50b(uM) %ofligand bindingc Androstenedione 640 – 0.93 Bicalutamide – 12.0 14.76 Dexamethasone – 188.5 0.53 DHT 10 0.057 17.60 Dibutylphthalate 0.0017 – 1.75 Flutamide 0.0082 73.4 8.37 Hydroxyflutamide – 33.0 11.02 Levonogestrel 11.87 – 8.05 Lidocaine – – 0.65
aRelativebindingaffinities(recombinantratLBD)[7].
b IC
50measuredwithScintillationProximityAssay(recombinantratLBD)[8]. c Percentofligandbinding–signalratioofincubatedligandsinsupernatantto
signalofpurestandard.
(NH2)3(NT)-AR magnetic beads versus control (Fig. 3).Further,
incubationofFe3O4CS-(NH2)3(NT)-ARmagneticbeadswithother
compounds(androstenedione,dexamethasone,dibutylphthalate, lidocaine),resultedinnoretentioninS3andS4,indicating that thesecompounds were eitherweak binders or non-binders. In Table 2, a clear difference is seen by the% of ligand retained (S3+S4)betweenweakbinders/non-bindersandstrongbinders (0.96±0.54)%vs(11.97±4.14)%,respectively(p=0.0012).Further, alineartrend wasfoundbetweenreportedIC50 values andthe
amountof retained ligand (y=0.838+15.601, r2=0.9477),
indi-catingthatFe3O4CS-(NH2)3(NT)-ARmagneticbeadsarea viable
optionforscreeningofcomplexmixturestoisolateandidentify novelandrogensoranti-androgens.Inordertodeterminewhether the beads were able to sort binders from weak/non-binders simultaneously,amixtureofDHT,bicalutamide,dexamethasone and lidocaine wasincubated with theFe3O4CS-(NH2)3(NT)-AR nanoparticles(Fig.4).Aswasclearlydemonstrated,the Fe3O4CS-(NH2)3(NT)-AR nanoparticles had correctly retained DHT and bicalutamidewith12%and9%beingbound(S3+S4),respectively, and with less than 2% of dexamethasone and lidocaine, weak binders,beingretained,similartocontrol.While,someofthe com-poundsthatwerenotretainedbytheAR-coatedmagneticbeads, werenotreportedtobenon-binders,theliteraturedataonwhether acompoundisaweakAR-binderornon-binderisconflicting. Cur-rently,therecombinantARbindingassayisthemostcommonly usedmethodfordeterminingtheactivityofendocrineactive com-pounds,inthis methodthedatareportedismostoftenrelative totheappliedconditionsandasaresultisdifficulttocompareto classicbindingassay.Asaresult,basedonthereportedARbinding
propertiesofthetestedcompounds,intermsofrelativerankingof bindingaffinitiesofstrong,weakandno-marginalaffinity[8],our methodisonlycapableofdistinguishinghighaffinitybindersfrom weakbindersornon-binders(boundlessthan2%).
Thereportedresultsconfirmthatmagneticnanoparticlesmight beof specialimportanceinscreeningfornewpotentialligands. ThetypeofcoatingofFe3O4corehasthesignificantimpactonthe
effectiveimmobilizationofbiomolecules.ForAR-proteinthenew multifunctionalmagneticnanomaterialwithchemicallymodified chitosan(Fe3O4 CS-(NH2)3)wasdemonstratedtobeeffectivein
fishingoutligandswithhighaffinityfortheARfromamixtureof highaffinityandweak/non-binders.Thesubsequentdevelopment ofligandfishingtechniquebasedonthemagneticbeadsshould befocusedonthechemicalandphysicalmodificationofsurfaceof nanoparticles.Thiscanleadtomoreproductiveandeffectivetoolin newpotentialdrugscreening,evenwithweakbindingtotargeted protein.
Acknowledgments
Theprojectwassupportedbyresearchgrant:NationalScience Centre:DEC-2011/03/D/NZ7/02296.Thisworkwasalsosupported inpartbyfundsfromtheNIAIntramuralResearchProgram(RM).
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